Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fe(2+)-trafficking protein | HMPREF3212_01844 | Not Available | Negative | 1848712 - 1848981 | 10673.8 |
| a/g-specific adenine glycosylase | HMPREF3212_01845 | Not Available | Negative | 1849009 - 1850160 | 42984.8 |
| trna (guanine-n(7)-)-methyltransferase | HMPREF3212_01846 | Not Available | Positive | 1850222 - 1850941 | 27274.7 |
| hypothetical protein | HMPREF3212_01847 | Not Available | Positive | 1850941 - 1851267 | 12798.1 |
| hypothetical protein | HMPREF3212_01848 | Not Available | Positive | 1851317 - 1852036 | 26289.5 |
| l-asparaginase | HMPREF3212_01849 | Not Available | Positive | 1852225 - 1853271 | 36862.9 |
| putative oxygen-independent coproporphyrinogen iii oxidase | HMPREF3212_01850 | Not Available | Negative | 1853387 - 1854523 | 42564.4 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | HMPREF3212_01851 | Not Available | Negative | 1854516 - 1855109 | 20976.8 |
| tigr00251 family protein | HMPREF3212_01852 | Not Available | Negative | 1855117 - 1855407 | 10414.7 |
| yggt family protein | HMPREF3212_01853 | Not Available | Negative | 1855404 - 1855970 | 21124.4 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

