Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase atpase subunit | HMPREF3212_02241 | Not Available | Negative | 2249845 - 2251611 | 67036.6 |
| Capsid scaffolding protein | HMPREF3212_02242 | Not Available | Positive | 2251754 - 2252587 | 30468.7 |
| Major capsid protein, p2 family | HMPREF3212_02243 | Not Available | Positive | 2252604 - 2253668 | 39667.9 |
| Terminase endonuclease subunit | HMPREF3212_02244 | Not Available | Positive | 2253672 - 2254322 | 23804.6 |
| Head completion/stabilization protein | HMPREF3212_02245 | Not Available | Positive | 2254416 - 2254880 | 17652.8 |
| Tail protein | HMPREF3212_02246 | Not Available | Positive | 2254880 - 2255083 | 7541.89 |
| Holin | HMPREF3212_02247 | Not Available | Positive | 2255087 - 2255302 | 8085.95 |
| Lysozyme | HMPREF3212_02248 | Not Available | Positive | 2255283 - 2255798 | 18600.6 |
| P2 lysb-like protein | HMPREF3212_02249 | Not Available | Positive | 2255795 - 2256217 | 15732.7 |
| P2 gpr-like tail completion protein | HMPREF3212_02250 | Not Available | Positive | 2256241 - 2256744 | 18954.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

