Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snare-like domain protein | HMPREF3212_01815 | Not Available | Negative | 1820927 - 1821586 | 24244.4 |
| cystathionine beta-lyase | HMPREF3212_01816 | Not Available | Negative | 1821718 - 1822905 | 42967.4 |
| hypothetical protein | HMPREF3212_01817 | Not Available | Positive | 1823005 - 1823163 | 6222.67 |
| tonb-system energizer exbb | HMPREF3212_01818 | Not Available | Positive | 1823171 - 1823890 | 25677.2 |
| tonb system transport protein exbd | HMPREF3212_01819 | Not Available | Positive | 1823897 - 1824322 | 15616.0 |
| hypothetical protein | HMPREF3212_01820 | Not Available | Negative | 1824400 - 1824807 | 15544.6 |
| hypothetical protein | HMPREF3212_01821 | Not Available | Negative | 1824809 - 1825048 | 9241.07 |
| hypothetical protein | HMPREF3212_01822 | Not Available | Positive | 1825318 - 1825821 | 19488.3 |
| oxidoreductase, aldo/keto reductase family protein | HMPREF3212_01823 | Not Available | Negative | 1825892 - 1826932 | 38897.4 |
| tat pathway signal sequence domain protein | HMPREF3212_01824 | Not Available | Positive | 1827022 - 1827975 | 35152.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

