Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv, b subunit | HMPREF3212_01795 | Not Available | Positive | 1795835 - 1797727 | 70158.7 |
| transcriptional regulator, arac family | HMPREF3212_01796 | Not Available | Negative | 1797768 - 1798619 | 32707.2 |
| hypothetical protein | HMPREF3212_01797 | Not Available | Positive | 1798785 - 1800605 | 68406.5 |
| putative galactoside permease | HMPREF3212_01798 | Not Available | Positive | 1800616 - 1801884 | 46825.1 |
| putative unsaturated glucuronyl hydrolase | HMPREF3212_01799 | Not Available | Positive | 1801908 - 1803098 | 45081.2 |
| antibiotic biosynthesis monooxygenase | HMPREF3212_01800 | Not Available | Negative | 1803171 - 1803485 | 11513.9 |
| flavodoxin-like protein | HMPREF3212_01801 | Not Available | Negative | 1803516 - 1804097 | 21742.9 |
| sensor protein qsec | HMPREF3212_01802 | Not Available | Negative | 1804207 - 1805556 | 50323.5 |
| transcriptional regulatory protein qseb | HMPREF3212_01803 | Not Available | Negative | 1805553 - 1806236 | 25312.6 |
| tigr00156 family protein | HMPREF3212_01804 | Not Available | Positive | 1806357 - 1806761 | 14388.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

