Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_01785 | Not Available | Positive | 1787567 - 1787770 | 8117.07 |
| metal cation transporter, zip family | HMPREF3212_01786 | Not Available | Negative | 1787836 - 1788657 | 28259.7 |
| aromatic ring-opening dioxygenase, catalytic subunit ligb | HMPREF3212_01787 | Not Available | Positive | 1788772 - 1789545 | 28200.7 |
| glutathionylspermidine synthase | HMPREF3212_01788 | Not Available | Negative | 1789631 - 1790791 | 44962.3 |
| hypothetical protein | HMPREF3212_01789 | Not Available | Negative | 1790797 - 1791474 | 23519.7 |
| outer membrane channel protein | HMPREF3212_01790 | Not Available | Negative | 1791632 - 1793122 | 53857.7 |
| adp-ribose pyrophosphatase | HMPREF3212_01791 | Not Available | Positive | 1793346 - 1793954 | 22956.2 |
| hypothetical protein | HMPREF3212_01792 | Not Available | Positive | 1793951 - 1794373 | 16485.7 |
| 3',5'-cyclic-nucleotide phosphodiesterase | HMPREF3212_01793 | Not Available | Positive | 1794398 - 1795225 | 30969.6 |
| hypothetical protein | HMPREF3212_01794 | Not Available | Positive | 1795225 - 1795806 | 21707.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

