Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative threonine ammonia-lyase | HMPREF3212_01685 | Not Available | Positive | 1687080 - 1688069 | 35057.4 |
| serine transporter | HMPREF3212_01686 | Not Available | Positive | 1688092 - 1689423 | 48833.7 |
| acetate kinase | HMPREF3212_01687 | Not Available | Positive | 1689455 - 1690663 | 43540.1 |
| formate c-acetyltransferase | HMPREF3212_01688 | Not Available | Positive | 1690692 - 1692986 | 86032.5 |
| putative endoribonuclease l-psp | HMPREF3212_01689 | Not Available | Positive | 1693000 - 1693395 | 14153.0 |
| l-serine ammonia-lyase | HMPREF3212_01690 | Not Available | Positive | 1693483 - 1694847 | 48345.2 |
| serine transporter | HMPREF3212_01691 | Not Available | Positive | 1695130 - 1696461 | 48432.9 |
| hypothetical protein | HMPREF3212_01692 | Not Available | Positive | 1696486 - 1697796 | 45331.7 |
| hypothetical protein | HMPREF3212_01693 | Not Available | Negative | 1697851 - 1698000 | 5652.73 |
| pirin family protein | HMPREF3212_01694 | Not Available | Negative | 1698027 - 1698728 | 25831.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

