Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, permease protein | HMPREF3212_01654 | Not Available | Negative | 1657959 - 1658783 | 30650.2 |
| abc transporter, permease protein | HMPREF3212_01655 | Not Available | Negative | 1658794 - 1659738 | 35886.7 |
| abc transporter, solute-binding protein | HMPREF3212_01656 | Not Available | Negative | 1659817 - 1661076 | 46961.8 |
| galactarate dehydratase | HMPREF3212_01657 | Not Available | Negative | 1661432 - 1663003 | 56290.8 |
| putative galactarate transporter | HMPREF3212_01658 | Not Available | Positive | 1663407 - 1664741 | 49175.2 |
| 2-dehydro-3-deoxyglucarate aldolase | HMPREF3212_01659 | Not Available | Positive | 1664757 - 1665527 | 27323.6 |
| 2-hydroxy-3-oxopropionate reductase | HMPREF3212_01660 | Not Available | Positive | 1665558 - 1666448 | 30602.5 |
| glycerate kinase | HMPREF3212_01661 | Not Available | Positive | 1666463 - 1667659 | 41202.4 |
| hypothetical protein | HMPREF3212_01663 | Not Available | Negative | 1668276 - 1668506 | 9037.94 |
| transcriptional regulator, arac family | HMPREF3212_01664 | Not Available | Negative | 1668530 - 1669369 | 33485.3 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

