Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | HMPREF3212_01624 | Not Available | Positive | 1627900 - 1630029 | 76805.2 |
| lipoprotein nlpi | HMPREF3212_01625 | Not Available | Positive | 1630142 - 1631026 | 33553.5 |
| cold-shock dead-box protein a | HMPREF3212_01626 | Not Available | Positive | 1631155 - 1633134 | 74134.8 |
| tryptophan-specific transport protein | HMPREF3212_01627 | Not Available | Positive | 1633272 - 1634516 | 44511.4 |
| luciferase family oxidoreductase, fmn-dependent, pp_0088 family | HMPREF3212_01628 | Not Available | Negative | 1634604 - 1635611 | 36984.4 |
| peptidase, u32 family | HMPREF3212_01629 | Not Available | Negative | 1635788 - 1636684 | 33145.9 |
| peptidase, u32 family | HMPREF3212_01630 | Not Available | Negative | 1636675 - 1637670 | 36981.1 |
| scp-2 sterol transfer family protein | HMPREF3212_01631 | Not Available | Positive | 1637939 - 1638415 | 17895.6 |
| acetyltransferase, gnat family | HMPREF3212_01632 | Not Available | Positive | 1638409 - 1638912 | 18507.7 |
| giy-yig catalytic domain protein | HMPREF3212_01633 | Not Available | Negative | 1638899 - 1639213 | 11743.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

