Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | HMPREF3212_01603 | Not Available | Negative | 1606804 - 1608237 | 51644.2 |
| transcription elongation factor grea | HMPREF3212_01604 | Not Available | Positive | 1608486 - 1608962 | 17681.0 |
| rna-binding protein, yhby family | HMPREF3212_01605 | Not Available | Negative | 1609116 - 1609466 | 13059.1 |
| ribosomal rna large subunit methyltransferase j | HMPREF3212_01606 | Not Available | Positive | 1609535 - 1610164 | 23246.3 |
| cell division protease ftsh | HMPREF3212_01607 | Not Available | Positive | 1610264 - 1612198 | 70710.3 |
| dihydropteroate synthase | HMPREF3212_01608 | Not Available | Positive | 1612297 - 1613145 | 30667.1 |
| phosphoglucosamine mutase | HMPREF3212_01609 | Not Available | Positive | 1613138 - 1614475 | 47541.5 |
| putative anaerobic c4-dicarboxylate transporter dcuc | HMPREF3212_01610 | Not Available | Negative | 1614523 - 1615986 | 51616.3 |
| beta-aspartyl peptidase | HMPREF3212_01611 | Not Available | Negative | 1615997 - 1617130 | 39958.6 |
| transcriptional regulator, lysr family | HMPREF3212_01612 | Not Available | Positive | 1617249 - 1618172 | 35468.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

