Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-54 factor | HMPREF3212_01583 | Not Available | Negative | 1591119 - 1592552 | 53935.8 |
| lipopolysaccharide abc transporter, atp-binding protein lptb | HMPREF3212_01584 | Not Available | Negative | 1592599 - 1593324 | 26830.4 |
| lipopolysaccharide transport periplasmic protein lpta | HMPREF3212_01585 | Not Available | Negative | 1593331 - 1593879 | 19746.6 |
| lipopolysaccharide export system protein lptc | HMPREF3212_01586 | Not Available | Negative | 1593848 - 1594423 | 21697.8 |
| 3-deoxy-manno-octulosonate-8-phosphatase | HMPREF3212_01587 | Not Available | Negative | 1594420 - 1594986 | 19888.1 |
| arabinose 5-phosphate isomerase | HMPREF3212_01588 | Not Available | Negative | 1595007 - 1595993 | 34931.9 |
| k+-dependent na+/ca+ exchanger family protein | HMPREF3212_01589 | Not Available | Negative | 1596007 - 1596984 | 34641.0 |
| toluene tolerance protein ttg2a | HMPREF3212_01590 | Not Available | Positive | 1597200 - 1598000 | 28820.4 |
| toluene tolerance protein ttg2b | HMPREF3212_01591 | Not Available | Positive | 1598020 - 1598802 | 27837.0 |
| hypothetical protein | HMPREF3212_01592 | Not Available | Positive | 1598807 - 1599364 | 19903.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

