Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stringent starvation protein b | HMPREF3212_01562 | Not Available | Positive | 1566020 - 1566523 | 18361.4 |
| hypothetical protein | HMPREF3212_01563 | Not Available | Negative | 1566580 - 1567947 | 48470.5 |
| transcriptional repressor nanr | HMPREF3212_01564 | Not Available | Positive | 1568308 - 1569099 | 29839.4 |
| n-acetylneuraminate lyase | HMPREF3212_01565 | Not Available | Positive | 1569359 - 1570252 | 32676.5 |
| putative sialic acid transporter | HMPREF3212_01566 | Not Available | Positive | 1570363 - 1571853 | 53792.7 |
| putative n-acetylmannosamine kinase | HMPREF3212_01567 | Not Available | Positive | 1571960 - 1572829 | 29558.7 |
| yhch/yjgk/yial family protein | HMPREF3212_01568 | Not Available | Positive | 1572826 - 1573299 | 17368.2 |
| cytosine deaminase | HMPREF3212_01569 | Not Available | Negative | 1573358 - 1574638 | 47779.1 |
| cytosine permease | HMPREF3212_01570 | Not Available | Negative | 1574628 - 1575902 | 44114.5 |
| hypothetical protein | HMPREF3212_01571 | Not Available | Negative | 1576016 - 1577098 | 41555.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

