Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease g | HMPREF3212_01542 | Not Available | Positive | 1545276 - 1546745 | 55515.7 |
| tigr02099 family protein | HMPREF3212_01543 | Not Available | Positive | 1546836 - 1550672 | 140370.0 |
| hypothetical protein | HMPREF3212_01544 | Not Available | Positive | 1550674 - 1550826 | 5575.88 |
| tldd/pmba family protein | HMPREF3212_01545 | Not Available | Positive | 1550819 - 1552279 | 51746.6 |
| lysr substrate binding domain protein | HMPREF3212_01546 | Not Available | Negative | 1552366 - 1553277 | 33574.8 |
| protein aaex | HMPREF3212_01547 | Not Available | Positive | 1553480 - 1553683 | 7861.04 |
| efflux transporter, rnd family, mfp subunit | HMPREF3212_01548 | Not Available | Positive | 1553691 - 1554623 | 34679.6 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | HMPREF3212_01549 | Not Available | Positive | 1554629 - 1556596 | 73358.8 |
| hypothetical protein | HMPREF3212_01550 | Not Available | Positive | 1556716 - 1556994 | 10996.1 |
| hypothetical protein | HMPREF3212_01551 | Not Available | Negative | 1557052 - 1557318 | 9314.13 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

