Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, biotin carboxyl carrier protein | HMPREF3212_01532 | Not Available | Negative | 1536030 - 1536500 | 16704.2 |
| hypothetical protein | HMPREF3212_01533 | Not Available | Positive | 1536617 - 1536739 | 4575.82 |
| ferric reductase like transmembrane component | HMPREF3212_01534 | Not Available | Negative | 1536893 - 1537492 | 22743.7 |
| tat pathway signal sequence domain protein | HMPREF3212_01535 | Not Available | Negative | 1537493 - 1538497 | 37250.6 |
| quinone oxidoreductase, yhdh/yhfp family | HMPREF3212_01536 | Not Available | Negative | 1538617 - 1539591 | 34515.7 |
| diguanylate cyclase domain protein | HMPREF3212_01537 | Not Available | Positive | 1539730 - 1541757 | 76493.0 |
| rod shape-determining protein mreb | HMPREF3212_01538 | Not Available | Positive | 1542064 - 1543107 | 36954.7 |
| rod shape-determining protein mrec | HMPREF3212_01539 | Not Available | Positive | 1543174 - 1544196 | 36848.8 |
| rod shape-determining protein mred | HMPREF3212_01540 | Not Available | Positive | 1544197 - 1544685 | 18715.7 |
| septum formation protein maf | HMPREF3212_01541 | Not Available | Positive | 1544693 - 1545286 | 21345.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

