Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_01481 | Not Available | Negative | 1484323 - 1485690 | 51591.2 |
| hypothetical protein | HMPREF3212_01482 | Not Available | Negative | 1485703 - 1485990 | 10906.8 |
| type i secretion membrane fusion protein, hlyd family | HMPREF3212_01483 | Not Available | Negative | 1486125 - 1487453 | 49223.6 |
| type i secretion system atpase | HMPREF3212_01484 | Not Available | Negative | 1487453 - 1489192 | 63006.5 |
| type i secretion target ggxgxdxxx repeat-containing domain protein | HMPREF3212_01485 | Not Available | Negative | 1489203 - 1494533 | 187526.0 |
| fimbrial protein | HMPREF3212_01486 | Not Available | Positive | 1495535 - 1496089 | 18646.0 |
| gram-negative pili assembly chaperone domain protein | HMPREF3212_01487 | Not Available | Positive | 1496104 - 1496817 | 26182.8 |
| fimbrial usher protein | HMPREF3212_01488 | Not Available | Positive | 1496804 - 1499281 | 90194.4 |
| hypothetical protein | HMPREF3212_01489 | Not Available | Positive | 1499278 - 1500621 | 47949.0 |
| gram-negative pili assembly chaperone domain protein | HMPREF3212_01490 | Not Available | Positive | 1500629 - 1501285 | 24063.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

