Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | HMPREF3212_01451 | Not Available | Negative | 1454151 - 1455032 | 31457.4 |
| hypothetical protein | HMPREF3212_01453 | Not Available | Negative | 1455183 - 1455320 | 5227.21 |
| tat pathway signal sequence domain protein | HMPREF3212_01452 | Not Available | Positive | 1455320 - 1455907 | 21552.0 |
| formate dehydrogenase, alpha subunit | HMPREF3212_01454 | Not Available | Positive | 1455956 - 1458367 | 89724.6 |
| formate dehydrogenase, beta subunit | HMPREF3212_01455 | Not Available | Positive | 1458381 - 1459265 | 32347.5 |
| formate dehydrogenase, gamma subunit | HMPREF3212_01456 | Not Available | Positive | 1459258 - 1459914 | 25614.3 |
| inorganic diphosphatase | HMPREF3212_01457 | Not Available | Positive | 1460044 - 1460646 | 22220.7 |
| abc transporter, atp-binding protein | HMPREF3212_01458 | Not Available | Negative | 1460737 - 1462452 | 63826.3 |
| putative nad-dependent malic enzyme 3 | HMPREF3212_01459 | Not Available | Negative | 1462762 - 1464459 | 63248.9 |
| 30s ribosomal subunit s22 | HMPREF3212_01460 | Not Available | Negative | 1464639 - 1464779 | 5198.24 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

