Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic murein peptide-binding protein | HMPREF3212_01244 | Not Available | Positive | 1261877 - 1263457 | 58804.9 |
| transcriptional regulator, marr family | HMPREF3212_01245 | Not Available | Negative | 1263495 - 1264058 | 21212.8 |
| hypothetical protein | HMPREF3212_01246 | Not Available | Positive | 1264173 - 1264403 | 8098.76 |
| modulator of rho-dependent transcription termination | HMPREF3212_01247 | Not Available | Positive | 1264470 - 1264754 | 10674.6 |
| transcriptional regulator, deor family | HMPREF3212_01248 | Not Available | Negative | 1264751 - 1265521 | 27570.4 |
| glyoxalase family protein | HMPREF3212_01249 | Not Available | Positive | 1265642 - 1266025 | 14035.7 |
| oxidoreductase, zinc-binding dehydrogenase family protein | HMPREF3212_01250 | Not Available | Positive | 1266198 - 1266707 | 18368.2 |
| transporter, small conductance mechanosensitive ion channel mscs family protein | HMPREF3212_01251 | Not Available | Negative | 1266745 - 1267797 | 39324.2 |
| hypothetical protein | HMPREF3212_01252 | Not Available | Positive | 1268021 - 1268281 | 9417.96 |
| universal stress family protein | HMPREF3212_01253 | Not Available | Negative | 1268330 - 1269280 | 35829.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

