Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, atp-binding protein | HMPREF3212_01234 | Not Available | Positive | 1251382 - 1252464 | 39999.7 |
| outer membrane protein g | HMPREF3212_01235 | Not Available | Positive | 1252532 - 1253437 | 34723.7 |
| transcriptional regulator, laci family | HMPREF3212_01236 | Not Available | Negative | 1253470 - 1254480 | 36733.1 |
| phage shock operon rhodanese pspe | HMPREF3212_01237 | Not Available | Positive | 1254709 - 1255026 | 11705.3 |
| ycjx-like family, duf463 | HMPREF3212_01238 | Not Available | Positive | 1255163 - 1256566 | 52919.8 |
| tigr01620 family protein | HMPREF3212_01239 | Not Available | Positive | 1256563 - 1257624 | 39327.4 |
| sigma-54 interaction domain protein | HMPREF3212_01240 | Not Available | Positive | 1257771 - 1259315 | 57877.9 |
| redoxin family protein | HMPREF3212_01241 | Not Available | Negative | 1259369 - 1259875 | 17796.3 |
| mandelate racemase/muconate lactonizing enzyme protein | HMPREF3212_01242 | Not Available | Positive | 1259991 - 1260956 | 34401.4 |
| zinc carboxypeptidase | HMPREF3212_01243 | Not Available | Negative | 1260931 - 1261659 | 26305.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

