Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_01225 | Not Available | Negative | 1240615 - 1240737 | 4815.91 |
| alpha amylase, catalytic domain protein | HMPREF3212_01224 | Not Available | Positive | 1240736 - 1242442 | 64645.7 |
| abc transporter, solute-binding protein | HMPREF3212_01226 | Not Available | Positive | 1242459 - 1243751 | 46624.0 |
| abc transporter, permease protein | HMPREF3212_01227 | Not Available | Positive | 1243751 - 1244653 | 34118.5 |
| abc transporter, permease protein | HMPREF3212_01228 | Not Available | Positive | 1244640 - 1245482 | 31212.1 |
| oxidoreductase, zinc-binding dehydrogenase family protein | HMPREF3212_01229 | Not Available | Positive | 1245510 - 1246562 | 38277.7 |
| ap endonuclease, family 2 | HMPREF3212_01230 | Not Available | Positive | 1246570 - 1247367 | 30176.0 |
| oxidoreductase, nad-binding domain protein | HMPREF3212_01231 | Not Available | Positive | 1247378 - 1248433 | 38850.6 |
| glycosyl hydrolase family 65 central catalytic domain protein | HMPREF3212_01232 | Not Available | Positive | 1248430 - 1250706 | 85264.0 |
| beta-phosphoglucomutase | HMPREF3212_01233 | Not Available | Positive | 1250703 - 1251371 | 23952.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

