Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide transport system atp-binding protein sapd | HMPREF3212_01214 | Not Available | Negative | 1232397 - 1233389 | 37658.9 |
| peptide transport system permease protein sapc | HMPREF3212_01215 | Not Available | Negative | 1233389 - 1234279 | 31532.0 |
| peptide transport system permease protein sapb | HMPREF3212_01216 | Not Available | Negative | 1234266 - 1235231 | 36082.3 |
| peptide transport periplasmic protein sapa | HMPREF3212_01217 | Not Available | Negative | 1235228 - 1236871 | 61533.0 |
| pentapeptide repeat protein | HMPREF3212_01218 | Not Available | Negative | 1237140 - 1237784 | 23775.1 |
| psp operon transcriptional activator | HMPREF3212_01219 | Not Available | Negative | 1237881 - 1238870 | 37319.1 |
| phage shock protein a | HMPREF3212_01220 | Not Available | Positive | 1239026 - 1239694 | 25481.3 |
| phage shock protein b | HMPREF3212_01221 | Not Available | Positive | 1239749 - 1239973 | 8849.6 |
| phage shock protein | HMPREF3212_01222 | Not Available | Positive | 1239973 - 1240332 | 13378.5 |
| phage shock protein pspd | HMPREF3212_01223 | Not Available | Positive | 1240341 - 1240571 | 8345.52 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

