Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator cysb | HMPREF3212_01194 | Not Available | Positive | 1213134 - 1214108 | 36113.3 |
| hypothetical protein | HMPREF3212_01195 | Not Available | Positive | 1214402 - 1214563 | 6055.51 |
| hypothetical protein | HMPREF3212_01196 | Not Available | Positive | 1214566 - 1214736 | 6404.17 |
| aconitate hydratase 1 | HMPREF3212_01197 | Not Available | Positive | 1215045 - 1217720 | 97466.6 |
| gtp cyclohydrolase ii | HMPREF3212_01198 | Not Available | Negative | 1217770 - 1218360 | 21721.2 |
| phosphatidylglycerophosphatase b | HMPREF3212_01199 | Not Available | Positive | 1218563 - 1219327 | 29135.2 |
| hypothetical protein | HMPREF3212_01200 | Not Available | Positive | 1219477 - 1219785 | 11334.1 |
| tetratricopeptide repeat protein | HMPREF3212_01201 | Not Available | Positive | 1219792 - 1220961 | 44556.6 |
| orotidine 5'-phosphate decarboxylase | HMPREF3212_01202 | Not Available | Positive | 1221091 - 1221888 | 28490.3 |
| putative translation initiation factor sui1 | HMPREF3212_01203 | Not Available | Positive | 1221889 - 1222215 | 11438.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

