Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | HMPREF3212_01184 | Not Available | Negative | 1200964 - 1202559 | 56880.4 |
| anthranilate synthase component i | HMPREF3212_01185 | Not Available | Negative | 1202559 - 1204133 | 57757.2 |
| php domain protein | HMPREF3212_01186 | Not Available | Positive | 1204498 - 1205274 | 28858.7 |
| sua5/ycio/yrdc/ywlc family protein | HMPREF3212_01187 | Not Available | Positive | 1205271 - 1205891 | 23128.1 |
| pseudouridine synthase b, ribosomal large subunit | HMPREF3212_01188 | Not Available | Positive | 1205992 - 1206867 | 32716.4 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | HMPREF3212_01189 | Not Available | Negative | 1206951 - 1207541 | 21830.1 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3212_01190 | Not Available | Negative | 1207538 - 1208299 | 27987.6 |
| putative signal peptide peptidase sppa | HMPREF3212_01191 | Not Available | Positive | 1208449 - 1209567 | 41938.1 |
| hypothetical protein | HMPREF3212_01192 | Not Available | Negative | 1209678 - 1209929 | 9376.23 |
| dna topoisomerase i | HMPREF3212_01193 | Not Available | Positive | 1210328 - 1212925 | 97403.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

