Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nte family protein rssa | HMPREF3212_01154 | Not Available | Positive | 1170839 - 1171750 | 33194.4 |
| protein hnr | HMPREF3212_01155 | Not Available | Positive | 1171841 - 1172854 | 37262.3 |
| utp--glucose-1-phosphate uridylyltransferase | HMPREF3212_01156 | Not Available | Positive | 1173059 - 1173967 | 32919.1 |
| dna-binding protein h-ns | HMPREF3212_01157 | Not Available | Negative | 1174104 - 1174517 | 15530.5 |
| thymidine kinase | HMPREF3212_01158 | Not Available | Positive | 1174906 - 1175745 | 31833.8 |
| aldehyde-alcohol dehydrogenase | HMPREF3212_01159 | Not Available | Negative | 1175982 - 1178660 | 96192.6 |
| membrane protein, marc family | HMPREF3212_01160 | Not Available | Positive | 1179058 - 1179795 | 26815.5 |
| periplasmic oligopeptide-binding protein | HMPREF3212_01161 | Not Available | Positive | 1180549 - 1182198 | 62234.6 |
| oligopeptide transport system permease protein oppb | HMPREF3212_01162 | Not Available | Positive | 1182321 - 1183241 | 33362.0 |
| oligopeptide abc transporter, permease protein oppc | HMPREF3212_01163 | Not Available | Positive | 1183256 - 1184164 | 33125.1 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

