Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate nitrite sensor protein narx | HMPREF3212_01142 | Not Available | Negative | 1157613 - 1159409 | 66958.5 |
| nitrite extrusion protein 1 | HMPREF3212_01143 | Not Available | Positive | 1159714 - 1161141 | 50952.8 |
| nitrate reductase, alpha subunit | HMPREF3212_01144 | Not Available | Positive | 1161656 - 1165399 | 140631.0 |
| nitrate reductase, beta subunit | HMPREF3212_01145 | Not Available | Positive | 1165396 - 1166934 | 57825.1 |
| nitrate reductase molybdenum cofactor assembly chaperone | HMPREF3212_01146 | Not Available | Positive | 1166931 - 1167641 | 26403.1 |
| respiratory nitrate reductase, gamma subunit | HMPREF3212_01147 | Not Available | Positive | 1167641 - 1168318 | 25518.9 |
| Trna-tyr | Not Available | Not Available | Positive | 1168839 - 1168923 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1169133 - 1169217 | Not Available |
| formyltetrahydrofolate deformylase | HMPREF3212_01152 | Not Available | Negative | 1169374 - 1170216 | 31936.7 |
| hypothetical protein | HMPREF3212_01153 | Not Available | Negative | 1170272 - 1170601 | 12391.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

