Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-(glutamine-n5) methyltransferase | HMPREF3212_01132 | Not Available | Positive | 1149249 - 1150082 | 30666.6 |
| invasion expression up-regulator, sirb | HMPREF3212_01133 | Not Available | Positive | 1150079 - 1150471 | 14674.7 |
| putative protein sirb1 | HMPREF3212_01134 | Not Available | Positive | 1150474 - 1151283 | 30817.9 |
| 3-deoxy-8-phosphooctulonate synthase | HMPREF3212_01135 | Not Available | Positive | 1151319 - 1152173 | 30754.2 |
| putative calcium/proton exchanger | HMPREF3212_01136 | Not Available | Negative | 1152272 - 1153372 | 39215.9 |
| chac-like protein | HMPREF3212_01137 | Not Available | Positive | 1153776 - 1154471 | 25283.5 |
| hypothetical protein | HMPREF3212_01138 | Not Available | Negative | 1154526 - 1154771 | 9080.83 |
| dsre/dsrf-like family protein | HMPREF3212_01139 | Not Available | Negative | 1155034 - 1155387 | 12578.4 |
| outer membrane insertion signal domain protein | HMPREF3212_01140 | Not Available | Positive | 1155563 - 1156948 | 51512.2 |
| nitrate/nitrite response regulator protein narl | HMPREF3212_01141 | Not Available | Negative | 1156970 - 1157620 | 23849.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

