Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha,alpha-trehalase | HMPREF3212_01069 | Not Available | Negative | 1087954 - 1089666 | 63656.0 |
| dihydroxyacetone kinase, phosphotransfer subunit | HMPREF3212_01070 | Not Available | Negative | 1089837 - 1091267 | 50832.0 |
| dihydroxyacetone kinase, l subunit | HMPREF3212_01071 | Not Available | Negative | 1091278 - 1091913 | 23051.7 |
| dihydroxyacetone kinase, dhak subunit | HMPREF3212_01072 | Not Available | Negative | 1091922 - 1092992 | 38280.6 |
| hypothetical protein | HMPREF3212_01073 | Not Available | Negative | 1092992 - 1093168 | 6580.16 |
| glutamate dehydrogenase | HMPREF3212_01074 | Not Available | Negative | 1093318 - 1094592 | 46155.2 |
| spore coat protein u domain protein | HMPREF3212_01075 | Not Available | Negative | 1094914 - 1095738 | 28126.8 |
| fimbrial usher protein | HMPREF3212_01076 | Not Available | Negative | 1095896 - 1098265 | 85080.2 |
| hypothetical protein | HMPREF3212_01077 | Not Available | Negative | 1098237 - 1098908 | 24036.8 |
| spore coat protein u domain protein | HMPREF3212_01078 | Not Available | Negative | 1098974 - 1099504 | 17707.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

