Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | HMPREF3212_01038 | Not Available | Positive | 1056388 - 1058298 | 70379.9 |
| universal bacterial protein yeaz | HMPREF3212_01039 | Not Available | Positive | 1058357 - 1059052 | 24777.8 |
| outer membrane lipoprotein, slp family | HMPREF3212_01040 | Not Available | Positive | 1059147 - 1059731 | 21046.6 |
| ribonuclease d | HMPREF3212_01042 | Not Available | Positive | 1061706 - 1062821 | 42295.0 |
| tartrate dehydrogenase | HMPREF3212_01043 | Not Available | Negative | 1062872 - 1063957 | 40213.9 |
| lysr substrate binding domain protein | HMPREF3212_01044 | Not Available | Positive | 1064061 - 1064978 | 34834.2 |
| cell division topological specificity factor mine | HMPREF3212_01045 | Not Available | Negative | 1065065 - 1065331 | 10182.4 |
| septum site-determining protein mind | HMPREF3212_01046 | Not Available | Negative | 1065335 - 1066147 | 29586.8 |
| septum site-determining protein minc | HMPREF3212_01047 | Not Available | Negative | 1066171 - 1066908 | 26263.9 |
| ycgl domain protein | HMPREF3212_01048 | Not Available | Positive | 1067005 - 1067298 | 11185.6 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

