Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_01008 | Not Available | Negative | 1026663 - 1026953 | 10742.7 |
| rrna (cytosine-c(5)-)-methyltransferase rsmf | HMPREF3212_01009 | Not Available | Negative | 1027000 - 1028421 | 52627.7 |
| hypothetical protein | HMPREF3212_01010 | Not Available | Negative | 1028501 - 1031134 | 94812.6 |
| integral membrane protein, pqia family | HMPREF3212_01011 | Not Available | Negative | 1031103 - 1032173 | 40078.4 |
| gaf domain protein | HMPREF3212_01012 | Not Available | Positive | 1032515 - 1033012 | 18027.4 |
| prop effector | HMPREF3212_01013 | Not Available | Positive | 1033109 - 1033795 | 25398.4 |
| peptidase, s41 family | HMPREF3212_01014 | Not Available | Positive | 1033815 - 1035863 | 76540.1 |
| htpx protein | HMPREF3212_01015 | Not Available | Positive | 1036056 - 1036937 | 31886.3 |
| transporter, major facilitator family protein | HMPREF3212_01016 | Not Available | Negative | 1036984 - 1038357 | 48190.6 |
| transcriptional regulator kdgr | HMPREF3212_01017 | Not Available | Positive | 1038532 - 1039323 | 30105.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

