Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3212_00978 | Not Available | Negative | 1000687 - 1001304 | 22498.8 |
| aminotransferase | HMPREF3212_00979 | Not Available | Negative | 1001785 - 1003023 | 46068.5 |
| hypothetical protein | HMPREF3212_00980 | Not Available | Negative | 1003088 - 1003225 | 5411.69 |
| lyts/yhck-type transmembrane receptor domain protein | HMPREF3212_00981 | Not Available | Positive | 1003348 - 1005108 | 64888.9 |
| putative protein mrke | HMPREF3212_00982 | Not Available | Positive | 1005123 - 1005857 | 28734.7 |
| transcriptional regulator, arac family | HMPREF3212_00983 | Not Available | Positive | 1005873 - 1006736 | 32736.6 |
| hypothetical protein | HMPREF3212_00984 | Not Available | Negative | 1006774 - 1007157 | 13900.4 |
| hypothetical protein | HMPREF3212_00985 | Not Available | Positive | 1007339 - 1007491 | 5697.18 |
| phosphoenolpyruvate-protein phosphotransferase | HMPREF3212_00986 | Not Available | Negative | 1007535 - 1010030 | 92356.8 |
| m42 glutamyl aminopeptidase | HMPREF3212_00987 | Not Available | Negative | 1010054 - 1011094 | 37364.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

