Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside triphosphatase nudi | HMPREF3212_00878 | Not Available | Positive | 903069 - 903431 | 13607.0 |
| udp-4-amino-4-deoxy-l-arabinose--oxoglutarate aminotransferase | HMPREF3212_00879 | Not Available | Positive | 903713 - 904855 | 41604.1 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | HMPREF3212_00880 | Not Available | Positive | 904858 - 905841 | 36597.6 |
| udp-l-ara4n formyltransferase/udp-glca c-4'-decarboxylase | HMPREF3212_00881 | Not Available | Positive | 905838 - 907820 | 74022.4 |
| polysaccharide deacetylase | HMPREF3212_00882 | Not Available | Positive | 907817 - 908719 | 33307.8 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | HMPREF3212_00883 | Not Available | Positive | 908716 - 910374 | 62568.1 |
| multidrug resistance protein, smr family | HMPREF3212_00884 | Not Available | Positive | 910371 - 910706 | 12301.7 |
| hypothetical protein | HMPREF3212_00885 | Not Available | Positive | 910706 - 911092 | 13728.5 |
| signal transduction protein pmrd | HMPREF3212_00886 | Not Available | Negative | 911095 - 911358 | 10027.3 |
| o-succinylbenzoate-coa ligase | HMPREF3212_00887 | Not Available | Negative | 911454 - 912878 | 51975.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

