Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type biogenesis protein ccme | HMPREF3212_00837 | Not Available | Negative | 858301 - 858780 | 17946.6 |
| heme exporter protein ccmd | HMPREF3212_00838 | Not Available | Negative | 858777 - 858989 | 7773.6 |
| heme exporter protein | HMPREF3212_00839 | Not Available | Negative | 858986 - 859723 | 27846.0 |
| heme exporter protein ccmb | HMPREF3212_00840 | Not Available | Negative | 859800 - 860459 | 23457.2 |
| heme abc exporter, atp-binding protein ccma | HMPREF3212_00841 | Not Available | Negative | 860456 - 861076 | 23228.8 |
| cytochrome c-type protein napc | HMPREF3212_00842 | Not Available | Negative | 861097 - 861699 | 23287.1 |
| periplasmic nitrate reductase, diheme cytochrome c subunit | HMPREF3212_00843 | Not Available | Negative | 861709 - 862179 | 17078.4 |
| ferredoxin-type protein naph | HMPREF3212_00844 | Not Available | Negative | 862155 - 863018 | 31702.1 |
| ferredoxin-type protein napg | HMPREF3212_00845 | Not Available | Negative | 863005 - 863649 | 22969.8 |
| periplasmic nitrate reductase, large subunit | HMPREF3212_00846 | Not Available | Negative | 863707 - 866193 | 93095.2 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

