Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative transposase orfb | HMPREF3212_01117 | Not Available | Negative | 1132749 - 1132958 | 7950.65 |
| hypothetical protein | HMPREF3212_01118 | Not Available | Positive | 1132959 - 1133210 | 9413.44 |
| Putative prophage integrase | HMPREF3212_01119 | Not Available | Negative | 1133355 - 1134530 | 44878.0 |
| Attr | Not Available | Not Available | Positive | 1138680 - 1138694 | Not Available |
| Attl | Not Available | Not Available | Positive | 1267501 - 1267512 | Not Available |
| Helicase-like protein | HMPREF3212_01263 | Not Available | Positive | 1278241 - 1279614 | 49181.7 |
| pp-loop family protein | HMPREF3212_01264 | Not Available | Negative | 1279708 - 1280643 | 35445.8 |
| Putative integrase | HMPREF3212_01265 | Not Available | Negative | 1280693 - 1281931 | 46820.8 |
| excisionase family protein | HMPREF3212_01266 | Not Available | Negative | 1281933 - 1282145 | 8236.94 |
| Hypothetical protein | HMPREF3212_01267 | Not Available | Negative | 1282210 - 1282452 | 9079.05 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

