Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-serine ammonia-lyase | HMPREF3212_00777 | Not Available | Negative | 796854 - 798158 | 47165.8 |
| hypothetical protein | HMPREF3212_00778 | Not Available | Positive | 798284 - 798436 | 6374.66 |
| phosphoserine phosphatase serb | HMPREF3212_00779 | Not Available | Positive | 798441 - 799328 | 33216.2 |
| putative membrane protein regulates uhpt expression | HMPREF3212_00780 | Not Available | Positive | 799360 - 800682 | 48648.4 |
| putative siderophore receptor irea | HMPREF3212_00781 | Not Available | Positive | 800965 - 803001 | 75141.4 |
| lysine-specific permease | HMPREF3212_00782 | Not Available | Negative | 803066 - 804535 | 53657.1 |
| lysr substrate binding domain protein | HMPREF3212_00783 | Not Available | Negative | 804731 - 805612 | 32649.5 |
| hypothetical protein | HMPREF3212_00784 | Not Available | Positive | 805791 - 806840 | 36858.4 |
| endonuclease 4 | HMPREF3212_00785 | Not Available | Positive | 806912 - 807769 | 31549.3 |
| hth domain protein | HMPREF3212_00786 | Not Available | Positive | 807772 - 808860 | 39966.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

