Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | GED7749C |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181982 bp
Thymine Count
1199014 bp
Guanine Count
1307879 bp
Cytosine Count
1237001 bp
Genome Length
4925876 bp
Protein-coding Genes
4675 genes
Non-Coding Genes
322 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, substrate-binding protein, qat family | HMPREF3212_00747 | Not Available | Negative | 764715 - 765632 | 32499.9 |
| glycosyl hydrolase family 3 protein | HMPREF3212_00748 | Not Available | Negative | 765828 - 768125 | 83460.6 |
| d-lactate dehydrogenase | HMPREF3212_00749 | Not Available | Positive | 768286 - 770067 | 67242.3 |
| d-alanyl-d-alanine endopeptidase | HMPREF3212_00750 | Not Available | Negative | 770132 - 771079 | 34251.8 |
| hypothetical protein | HMPREF3212_00751 | Not Available | Negative | 771260 - 771847 | 21631.9 |
| snare-like domain protein | HMPREF3212_00752 | Not Available | Positive | 772090 - 772659 | 21065.5 |
| putative multidrug resistance outer membrane protein mdtp | HMPREF3212_00753 | Not Available | Negative | 772697 - 774136 | 52150.4 |
| methyltransferase domain protein | HMPREF3212_00754 | Not Available | Positive | 774291 - 775040 | 28043.3 |
| pp_00741 | HMPREF3212_00755 | Not Available | Negative | 775263 - 776201 | Not Available |
| fad dependent oxidoreductase | HMPREF3212_00756 | Not Available | Negative | 776263 - 777456 | 44035.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

