Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | A6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain A6 chromosome circular, complete
Gene Summary
Adenine Count
586686 bp
Thymine Count
578925 bp
Guanine Count
826474 bp
Cytosine Count
840134 bp
Genome Length
2832219 bp
Protein-coding Genes
2634 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | AtA6_RS20705 | Not Available | Negative | 1445027 - 1445773 | 26706.9 |
| fatty acid desaturase | AtA6_RS20710 | Not Available | Negative | 1445794 - 1446837 | 40064.0 |
| helix-turn-helix domain-containing protein | AtA6_RS20715 | Not Available | Positive | 1446973 - 1447809 | 31453.8 |
| abc transporter atp-binding protein | AtA6_RS20720 | Not Available | Negative | 1447982 - 1449592 | 58673.1 |
| abc transporter permease | AtA6_RS20725 | Not Available | Negative | 1449594 - 1450724 | 41269.5 |
| abc transporter permease subunit | AtA6_RS20730 | Not Available | Negative | 1450717 - 1451640 | 33471.1 |
| peptide abc transporter substrate-binding protein | AtA6_RS20735 | Not Available | Negative | 1451694 - 1453289 | 58823.0 |
| methyl-accepting chemotaxis protein | AtA6_RS20745 | Not Available | Positive | 1453887 - 1455830 | 69179.8 |
| duf2161 domain-containing phosphodiesterase | AtA6_RS20750 | Not Available | Positive | 1456140 - 1456820 | 24673.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | AtA6_RS20755 | Not Available | Positive | 1456980 - 1458932 | 72368.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

