Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | A6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete
Gene Summary
Adenine Count
171197 bp
Thymine Count
173942 bp
Guanine Count
235850 bp
Cytosine Count
234864 bp
Genome Length
815853 bp
Protein-coding Genes
758 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Large packaging protein | AtA6_RS02940 | Not Available | Positive | 581878 - 583137 | 45814.1 |
| Hypothetical protein | AtA6_RS02945 | Not Available | Positive | 583588 - 584226 | 23474.3 |
| dabb family protein | AtA6_RS02950 | Not Available | Positive | 584270 - 584593 | 11866.0 |
| Portal protein | AtA6_RS02960 | Not Available | Positive | 584780 - 585946 | 42434.7 |
| duf6107 family protein | AtA6_RS02965 | Not Available | Positive | 586134 - 586454 | 11023.5 |
| Putative prohead protease | AtA6_RS02970 | Not Available | Positive | 586496 - 587086 | 21951.4 |
| Major capsid protein | AtA6_RS02975 | Not Available | Positive | 587124 - 588392 | 45482.0 |
| Dna packaging/head-tail-connector | AtA6_RS02980 | Not Available | Positive | 588505 - 589074 | 20664.2 |
| Head-tail connector complex protein | AtA6_RS02985 | Not Available | Positive | 589078 - 589413 | 12569.1 |
| Putative tail protein | AtA6_RS02990 | Not Available | Positive | 589410 - 589805 | 14254.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

