Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | A6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain A6 chromosome circular, complete
Gene Summary
Adenine Count
586686 bp
Thymine Count
578925 bp
Guanine Count
826474 bp
Cytosine Count
840134 bp
Genome Length
2832219 bp
Protein-coding Genes
2634 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed family protein | AtA6_RS01355 | Not Available | Positive | 274347 - 274541 | 7335.93 |
| glycine--trna ligase subunit alpha | AtA6_RS01360 | Not Available | Positive | 274642 - 275604 | 36085.6 |
| lema family protein | AtA6_RS01365 | Not Available | Positive | 275683 - 276234 | 20362.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AtA6_RS01370 | Not Available | Positive | 276319 - 277596 | 44706.7 |
| duf2207 domain-containing protein | AtA6_RS01375 | Not Available | Positive | 277620 - 279557 | 68287.8 |
| glycine--trna ligase subunit beta | AtA6_RS01380 | Not Available | Positive | 279656 - 281809 | 78678.5 |
| type ii toxin-antitoxin system rele/pare family toxin | AtA6_RS01385 | Not Available | Positive | 281851 - 282195 | 12566.0 |
| dna-binding protein | AtA6_RS01390 | Not Available | Positive | 282197 - 282511 | 11266.7 |
| duf523 domain-containing protein | AtA6_RS01395 | Not Available | Positive | 282511 - 282996 | 16691.2 |
| methyl-accepting chemotaxis protein | AtA6_RS01400 | Not Available | Negative | 283055 - 284878 | 65716.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

