Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | A6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain A6 chromosome circular, complete
Gene Summary
Adenine Count
586686 bp
Thymine Count
578925 bp
Guanine Count
826474 bp
Cytosine Count
840134 bp
Genome Length
2832219 bp
Protein-coding Genes
2634 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine utilization repressor | AtA6_RS13250 | Not Available | Positive | 2684319 - 2685056 | 27281.6 |
| tonb-system energizer exbb | AtA6_RS13255 | Not Available | Positive | 2685250 - 2686413 | 39704.6 |
| tonb system transport protein exbd | AtA6_RS13260 | Not Available | Positive | 2686420 - 2686905 | 16976.4 |
| tonb family protein | AtA6_RS13265 | Not Available | Positive | 2686902 - 2687828 | 33506.2 |
| ldh family oxidoreductase | AtA6_RS13270 | Not Available | Positive | 2688015 - 2689004 | 34249.2 |
| luxr c-terminal-related transcriptional regulator | AtA6_RS13275 | Not Available | Negative | 2689228 - 2689473 | 9063.94 |
| arac family transcriptional regulator | AtA6_RS13280 | Not Available | Negative | 2689857 - 2690897 | 38598.4 |
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | AtA6_RS13285 | Not Available | Negative | 2690985 - 2691596 | 21888.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | AtA6_RS13290 | Not Available | Negative | 2691593 - 2692729 | 41378.9 |
| duf1045 domain-containing protein | AtA6_RS13295 | Not Available | Negative | 2692726 - 2693424 | 26291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

