Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP5499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain CFBP5499 chromosome linear,
Gene Summary
Adenine Count
465823 bp
Thymine Count
469825 bp
Guanine Count
681096 bp
Cytosine Count
684581 bp
Genome Length
2301325 bp
Protein-coding Genes
1963 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | CFBP5499_RS12435 | Not Available | Negative | 2420088 - 2421071 | 33573.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | CFBP5499_RS12440 | Not Available | Negative | 2421071 - 2422168 | 38484.3 |
| hydroxymethylbilane synthase | CFBP5499_RS12445 | Not Available | Positive | 2422242 - 2423171 | 33525.3 |
| uroporphyrinogen-iii synthase | CFBP5499_RS12450 | Not Available | Positive | 2423176 - 2423916 | 26042.2 |
| cog4223 family protein | CFBP5499_RS12455 | Not Available | Positive | 2423990 - 2425450 | 49259.4 |
| heme biosynthesis protein hemy | CFBP5499_RS12460 | Not Available | Positive | 2425455 - 2427086 | 59191.1 |
| terb family tellurite resistance protein | CFBP5499_RS12465 | Not Available | Positive | 2427101 - 2427589 | 18361.4 |
| glutamine amidotransferase | CFBP5499_RS12470 | Not Available | Positive | 2427579 - 2428310 | 27593.4 |
| mfs transporter | CFBP5499_RS12475 | Not Available | Negative | 2428323 - 2429555 | 43474.2 |
| yggt family protein | CFBP5499_RS12480 | Not Available | Positive | 2429801 - 2430091 | 11005.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

