Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP5499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain CFBP5499 plasmid pAtCFBP5499c,
Gene Summary
Adenine Count
15837 bp
Thymine Count
15492 bp
Guanine Count
19557 bp
Cytosine Count
19962 bp
Genome Length
70848 bp
Protein-coding Genes
84 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp54 | CFBP5499_RS19045 | Not Available | Negative | 922347 - 922559 | 8049.28 |
| C-repressor | CFBP5499_RS19050 | Not Available | Negative | 922703 - 923389 | 24916.6 |
| helix-turn-helix domain-containing protein | CFBP5499_RS19060 | Not Available | Positive | 923520 - 923849 | 12103.6 |
| hypothetical protein | CFBP5499_RS19065 | Not Available | Positive | 924139 - 924882 | 27482.8 |
| hypothetical protein | CFBP5499_RS19070 | Not Available | Positive | 925014 - 925388 | 14360.4 |
| Chromosome partitioning protein parb | CFBP5499_RS19075 | Not Available | Positive | 925381 - 926226 | 31105.3 |
| Hypothetical protein | CFBP5499_RS19080 | Not Available | Positive | 926223 - 926687 | 17962.6 |
| Transposase | CFBP5499_RS19085 | Not Available | Positive | 926684 - 928702 | 74783.5 |
| Transposase b | CFBP5499_RS19090 | Not Available | Positive | 928781 - 929812 | 37254.4 |
| hypothetical protein | CFBP5499_RS19095 | Not Available | Positive | 929809 - 930135 | 11642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

