Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | CFBP5499 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain CFBP5499 chromosome linear,
Gene Summary
Adenine Count
465823 bp
Thymine Count
469825 bp
Guanine Count
681096 bp
Cytosine Count
684581 bp
Genome Length
2301325 bp
Protein-coding Genes
1963 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit delta | CFBP5499_RS21280 | Not Available | Positive | 1397187 - 1397501 | 11874.8 |
| sarcosine oxidase subunit alpha | CFBP5499_RS21285 | Not Available | Positive | 1397498 - 1400458 | 106669.0 |
| sarcosine oxidase subunit gamma | CFBP5499_RS21290 | Not Available | Positive | 1400451 - 1401005 | 19143.8 |
| duf2332 domain-containing protein | CFBP5499_RS21295 | Not Available | Negative | 1401002 - 1402042 | 38163.3 |
| transporter substrate-binding domain-containing protein | CFBP5499_RS21300 | Not Available | Negative | 1402070 - 1402792 | 26125.9 |
| maoc family dehydratase | CFBP5499_RS21305 | Not Available | Negative | 1402824 - 1403312 | 18011.4 |
| glycogen debranching protein glgx | CFBP5499_RS21310 | Not Available | Negative | 1403367 - 1405322 | 71745.9 |
| alpha-d-glucose phosphate-specific phosphoglucomutase | CFBP5499_RS21315 | Not Available | Negative | 1405428 - 1407056 | 57851.5 |
| glycogen synthase glga | CFBP5499_RS21320 | Not Available | Negative | 1407061 - 1408503 | 51718.2 |
| glucose-1-phosphate adenylyltransferase | CFBP5499_RS21325 | Not Available | Negative | 1408509 - 1409771 | 46998.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

