Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | 1D1460 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain 1D1460 chromosome linear,
Gene Summary
Adenine Count
420112 bp
Thymine Count
420227 bp
Guanine Count
620310 bp
Cytosine Count
621221 bp
Genome Length
2081870 bp
Protein-coding Genes
1875 genes
Non-Coding Genes
21 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repb | At1D1460_RS27120 | Not Available | Positive | 1088 - 2098 | 36494.6 |
| plasmid replication protein repc | At1D1460_RS27125 | Not Available | Positive | 2313 - 3632 | 48721.4 |
| recombinase family protein | At1D1460_RS27130 | Not Available | Negative | 3641 - 4582 | 34683.9 |
| rhe_pe00001 family protein | At1D1460_RS27135 | Not Available | Positive | 4865 - 5974 | 40857.2 |
| dead/deah box helicase | At1D1460_RS27140 | Not Available | Negative | 6155 - 8665 | 91970.2 |
| hypothetical protein | At1D1460_RS27145 | Not Available | Negative | 8868 - 10055 | 44855.6 |
| hypothetical protein | At1D1460_RS27150 | Not Available | Positive | 10289 - 11005 | 25737.1 |
| res family nad+ phosphorylase | At1D1460_RS27155 | Not Available | Positive | 11098 - 11598 | 18133.6 |
| hypothetical protein | At1D1460_RS27160 | Not Available | Positive | 11601 - 12593 | 35928.0 |
| hypothetical protein | At1D1460_RS27165 | Not Available | Positive | 12594 - 13094 | 18565.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |

