Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Genome Summary
Pseudomonas syringae isolate CFBP3840 plasmid PP4, complete
Gene Summary
Adenine Count
17590 bp
Thymine Count
17513 bp
Guanine Count
21169 bp
Cytosine Count
22076 bp
Genome Length
78348 bp
Protein-coding Genes
96 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | C6H39_RS21735 | Not Available | Negative | 4586769 - 4587884 | 40877.4 |
| valine--trna ligase | C6H39_RS21740 | Not Available | Positive | 4588053 - 4590899 | 107103.0 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | C6H39_RS21745 | Not Available | Positive | 4590986 - 4591972 | 36319.5 |
| hu family dna-binding protein | C6H39_RS21760 | Not Available | Negative | 4592832 - 4593113 | 9801.98 |
| nucleoid-associated protein yejk | C6H39_RS21765 | Not Available | Positive | 4593507 - 4594508 | 37430.1 |
| glutaredoxin family protein | C6H39_RS21770 | Not Available | Positive | 4594514 - 4594864 | 13079.0 |
| glutathione s-transferase family protein | C6H39_RS21780 | Not Available | Negative | 4595150 - 4596082 | 34129.9 |
| giy-yig nuclease family protein | C6H39_RS21785 | Not Available | Negative | 4596186 - 4596488 | 10939.1 |
| nuclear transport factor 2 family protein | C6H39_RS21790 | Not Available | Negative | 4596481 - 4596972 | 18656.0 |
| winged helix-turn-helix transcriptional regulator | C6H39_RS21795 | Not Available | Negative | 4597060 - 4597503 | 16449.8 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









