Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Genome Summary
Pseudomonas syringae isolate CFBP3840 plasmid PP4, complete
Gene Summary
Adenine Count
17590 bp
Thymine Count
17513 bp
Guanine Count
21169 bp
Cytosine Count
22076 bp
Genome Length
78348 bp
Protein-coding Genes
96 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66-like element accessory protein tnpa | C6H39_RS20130 | Not Available | Negative | 4241250 - 4241582 | 12085.7 |
| rna polymerase sigma factor rpos | C6H39_RS20140 | Not Available | Negative | 4242171 - 4243178 | 38163.6 |
| peptidoglycan dd-metalloendopeptidase family protein | C6H39_RS20145 | Not Available | Negative | 4243282 - 4244148 | 30358.2 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | C6H39_RS20150 | Not Available | Negative | 4244357 - 4244992 | 23466.7 |
| 5'/3'-nucleotidase sure | C6H39_RS20155 | Not Available | Negative | 4245034 - 4245783 | 26599.6 |
| trna pseudouridine(13) synthase trud | C6H39_RS20160 | Not Available | Negative | 4245771 - 4246829 | 38808.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | C6H39_RS20165 | Not Available | Negative | 4246826 - 4247299 | 16765.3 |
| s-formylglutathione hydrolase | C6H39_RS20170 | Not Available | Negative | 4247353 - 4248198 | 31394.9 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | C6H39_RS20175 | Not Available | Negative | 4248274 - 4249386 | 39247.7 |
| lysr family transcriptional regulator | C6H39_RS20180 | Not Available | Positive | 4249497 - 4250387 | 33752.5 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









