Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Plant |
Genome Summary
Pseudomonas syringae isolate CFBP3840 plasmid PP4, complete
Gene Summary
Adenine Count
17590 bp
Thymine Count
17513 bp
Guanine Count
21169 bp
Cytosine Count
22076 bp
Genome Length
78348 bp
Protein-coding Genes
96 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | C6H39_RS20030 | Not Available | Positive | 4222951 - 4223643 | 25599.0 |
| ferredoxin-nadp reductase | C6H39_RS20035 | Not Available | Negative | 4223723 - 4224502 | 29668.5 |
| lysr family transcriptional regulator | C6H39_RS20040 | Not Available | Positive | 4224626 - 4225552 | 34481.5 |
| diacylglycerol kinase | C6H39_RS20045 | Not Available | Negative | 4225560 - 4225925 | 12812.1 |
| response regulator transcription factor erdr | C6H39_RS20050 | Not Available | Negative | 4226009 - 4226656 | 23280.1 |
| pp_03778 | C6H39_RS20060 | Not Available | Negative | 4226902 - 4227612 | Not Available |
| quorum-sensing-regulated virulence factor family protein | C6H39_RS20065 | Not Available | Positive | 4227891 - 4228307 | 15353.6 |
| log family protein | C6H39_RS20070 | Not Available | Positive | 4228501 - 4229622 | 42399.7 |
| recombination regulator recx | C6H39_RS20075 | Not Available | Negative | 4229627 - 4230094 | 17828.4 |
| recombinase reca | C6H39_RS20080 | Not Available | Negative | 4230100 - 4231164 | 37702.6 |
Pathways
1338 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC3202874 |
| Necrosis | Causes | PMC3202874 |
| Foliar necroses and cankers | Causes | PMC6638699 |
| Bacterial canker | Causes | PMC8815115 |
| Blight | Causes | PMC12030312 |
| Plant diseases | Causes | PMC3029378 |
| Bacterial canker | Causes | PMC4803819 |
| Cherry canker | Causes | PMC9305585 |









