Flavobacterium sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. is a Gram-negative bacterium that is typically found in diverse environments, including nasal discharge and natural springs. This genus is characterized by its aerobic metabolism, requiring oxygen for growth and survival. The Gram-negative nature of Flavobacterium sp. indicates the presence of a double membrane structure, which is a hallmark of this group of bacteria, often contributing to their adaptability in various ecological niches. The occurrence of Flavobacterium sp. in nasal discharge suggests a potential role in the microbial communities associated with the nasal cavity, although the implications of this association remain to be fully understood. Similarly, its presence in natural springs highlights its adaptability to aquatic environments, where it may play a role in nutrient cycling and the degradation of organic matter. Understanding the ecological roles of Flavobacterium sp. could provide insights into the dynamics of microbial communities in both host-associated and natural environments. This adaptability and versatility underscore the potential significance of Flavobacterium sp. in biogeochemical processes, particularly in freshwater ecosystems, where its metabolic activities might influence the overall health and stability of these habitats. Further investigation into the specific functions and interactions of Flavobacterium sp. within these environments could enhance our understanding of microbial ecology and the contributions of bacteria to ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnasal discharge; natural spring
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Flavobacterium sp. isolate SAT130 MHASMcontig_1599426, whole

Gene Summary

Adenine Count

1051226 bp

Thymine Count

1053369 bp

Guanine Count

743932 bp

Cytosine Count

746960 bp

Genome Length

3595762 bp

Protein-coding Genes

3298 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-dependent alcohol dehydrogenaseDIU01_07825Not AvailableNegative1677137 - 167830343081.9
type 1 glutamine amidotransferase domain-containing proteinDIU01_07830Not AvailableNegative1678308 - 167897724240.6
crp/fnr family transcriptional regulatorDIU01_07835Not AvailableNegative1679264 - 167983922547.9
nicotinic acid mononucleotide adenylyltransferaseDIU01_07840Not AvailableNegative1679840 - 168042122821.4
guanylate kinaseDIU01_07845Not AvailableNegative1680520 - 168109222023.2
hypothetical proteinDIU01_07850Not AvailableNegative1681097 - 168149815565.8
hypothetical proteinDIU01_07855Not AvailableNegative1681836 - 168237621202.4
hypothetical proteinDIU01_07860Not AvailablePositive1682474 - 1688170197487.0
gntr family transcriptional regulatorDIU01_07865Not AvailableNegative1688636 - 168947532139.1
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthaseDIU01_07870Not AvailableNegative1689604 - 169065639791.8

Displaying genes 7251 – 7260 of 12177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gill diseasesCausesPMC11294328
Bacterial gill diseaseCausesPMC11294328

Displaying health effects 1 – 2 of 2 in total