Flavobacterium sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. is a Gram-negative bacterium that is typically found in diverse environments, including nasal discharge and natural springs. This genus is characterized by its aerobic metabolism, requiring oxygen for growth and survival. The Gram-negative nature of Flavobacterium sp. indicates the presence of a double membrane structure, which is a hallmark of this group of bacteria, often contributing to their adaptability in various ecological niches. The occurrence of Flavobacterium sp. in nasal discharge suggests a potential role in the microbial communities associated with the nasal cavity, although the implications of this association remain to be fully understood. Similarly, its presence in natural springs highlights its adaptability to aquatic environments, where it may play a role in nutrient cycling and the degradation of organic matter. Understanding the ecological roles of Flavobacterium sp. could provide insights into the dynamics of microbial communities in both host-associated and natural environments. This adaptability and versatility underscore the potential significance of Flavobacterium sp. in biogeochemical processes, particularly in freshwater ecosystems, where its metabolic activities might influence the overall health and stability of these habitats. Further investigation into the specific functions and interactions of Flavobacterium sp. within these environments could enhance our understanding of microbial ecology and the contributions of bacteria to ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnasal discharge; natural spring
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Flavobacterium sp. isolate SAT130 MHASMcontig_1599426, whole

Gene Summary

Adenine Count

1051226 bp

Thymine Count

1053369 bp

Guanine Count

743932 bp

Cytosine Count

746960 bp

Genome Length

3595762 bp

Protein-coding Genes

3298 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3857 domain-containing proteinDIU01_06145Not AvailableNegative1318163 - 132007072707.6
d-tyrosyl-trna(tyr) deacylaseDIU01_06150Not AvailableNegative1320122 - 132057416590.1
ribosome small subunit-dependent gtpase aDIU01_06155Not AvailableNegative1320648 - 132162837115.1
hypothetical proteinDIU01_06160Not AvailableNegative1321728 - 132225218881.9
3-deoxy-7-phosphoheptulonate synthaseDIU01_06165Not AvailableNegative1322328 - 132341340631.1
prephenate dehydrogenaseDIU01_06170Not AvailableNegative1323485 - 132432431368.0
aminotransferaseDIU01_06175Not AvailableNegative1324650 - 13248959257.1
aminotransferaseDIU01_06180Not AvailableNegative1325044 - 132586931139.6
prephenate dehydrataseDIU01_06185Not AvailableNegative1325956 - 132678331419.1
gliding motility-associated abc transporter atp-binding subunit gldaDIU01_06190Not AvailablePositive1327188 - 132809033476.0

Displaying genes 6921 – 6930 of 12177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gill diseasesCausesPMC11294328
Bacterial gill diseaseCausesPMC11294328

Displaying health effects 1 – 2 of 2 in total