Flavobacterium sp.

Rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium sp. is a Gram-negative bacterium that is typically found in diverse environments, including nasal discharge and natural springs. This genus is characterized by its aerobic metabolism, requiring oxygen for growth and survival. The Gram-negative nature of Flavobacterium sp. indicates the presence of a double membrane structure, which is a hallmark of this group of bacteria, often contributing to their adaptability in various ecological niches. The occurrence of Flavobacterium sp. in nasal discharge suggests a potential role in the microbial communities associated with the nasal cavity, although the implications of this association remain to be fully understood. Similarly, its presence in natural springs highlights its adaptability to aquatic environments, where it may play a role in nutrient cycling and the degradation of organic matter. Understanding the ecological roles of Flavobacterium sp. could provide insights into the dynamics of microbial communities in both host-associated and natural environments. This adaptability and versatility underscore the potential significance of Flavobacterium sp. in biogeochemical processes, particularly in freshwater ecosystems, where its metabolic activities might influence the overall health and stability of these habitats. Further investigation into the specific functions and interactions of Flavobacterium sp. within these environments could enhance our understanding of microbial ecology and the contributions of bacteria to ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium sp.
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium sp.
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatnasal discharge; natural spring
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Flavobacterium sp. isolate SAT130 MHASMcontig_1599426, whole

Gene Summary

Adenine Count

1051226 bp

Thymine Count

1053369 bp

Guanine Count

743932 bp

Cytosine Count

746960 bp

Genome Length

3595762 bp

Protein-coding Genes

3298 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
division/cell wall cluster transcriptional repressor mrazDC020_06885Not AvailablePositive1456242 - 145671217859.7
16s rrna (cytosine(1402)-n(4))-methyltransferaseDC020_06890Not AvailablePositive1456699 - 145759534183.9
s-adenosyl-methyltransferaseDC020_06895Not AvailablePositive1457599 - 145795513926.1
penicillin-binding proteinDC020_06900Not AvailablePositive1457946 - 145992873733.7
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDC020_06905Not AvailablePositive1459925 - 146138854401.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseDC020_06910Not AvailablePositive1461426 - 146264645015.1
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDC020_06915Not AvailablePositive1462648 - 146398249398.0
cell division protein ftswDC020_06920Not AvailablePositive1463995 - 146534749948.0
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseDC020_06925Not AvailablePositive1465348 - 146643639996.6
udp-n-acetylmuramate--l-alanine ligaseDC020_06930Not AvailablePositive1466476 - 146782249867.3

Displaying genes 4711 – 4720 of 12177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gill diseasesCausesPMC11294328
Bacterial gill diseaseCausesPMC11294328

Displaying health effects 1 – 2 of 2 in total