Helicobacter pylori str. ATCC 43504

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ATCC 43504 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which corresponds with the average human body temperature, underscoring its adaptation to a host-associated habitat. H. pylori is well-known for its colonization of the gastric epithelium in humans, where it can survive in the acidic environment of the stomach. The microaerophilic requirement indicates that this organism prefers low oxygen concentrations, which is typical of its ecological niche within the gastric mucus layer. This adaptation allows H. pylori to effectively evade the host's immune response and persist in the hostile gastric environment. The ability of H. pylori to maintain its structural integrity and metabolic functions under these conditions reflects its evolutionary specialization for survival in a unique ecological niche. This specialization may contribute to its role in various gastric conditions, although the specific pathogenic mechanisms and implications for human health associated with this strain are not detailed here. Understanding the physiological traits of H. pylori str. ATCC 43504 helps provide insights into its ecological dynamics and interactions within the human host.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainATCC 43504

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ATCC 43504
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain PMSS1 chromosome, complete genome.

Gene Summary

Adenine Count

488615 bp

Thymine Count

488780 bp

Guanine Count

310830 bp

Cytosine Count

314868 bp

Genome Length

1603093 bp

Protein-coding Genes

1494 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tryptophan synthase subunit alphaHPPMSS1_RS01095Not AvailableNegative219329 - 22011728767.1
tryptophan synthase subunit betaHPPMSS1_RS01100Not AvailableNegative220114 - 22129542795.7
bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpfHPPMSS1_RS01105Not AvailableNegative221297 - 22265550451.7
anthranilate phosphoribosyltransferaseHPPMSS1_RS01110Not AvailableNegative222648 - 22365536762.9
aminodeoxychorismate/anthranilate synthase component iiHPPMSS1_RS01115Not AvailableNegative223652 - 22423621542.4
anthranilate synthase component iHPPMSS1_RS01120Not AvailableNegative224233 - 22573556555.3
glycosyltransferase family 9 proteinHPPMSS1_RS01125Not AvailableNegative225970 - 22702839838.5
5'-nucleotidase, lipoprotein e(p4) familyHPPMSS1_RS01130Not AvailableNegative227095 - 22783227887.9
ycei family proteinHPPMSS1_RS01135Not AvailablePositive227956 - 22850420585.9
thiaminase iiHPPMSS1_RS01140Not AvailableNegative228567 - 22922025112.0

Displaying genes 221 – 230 of 3179 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total