Helicobacter pylori str. ATCC 43504

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori str. ATCC 43504 is a microaerophilic, Gram-negative bacterium characterized by its spirilla shape and single-cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which corresponds with the average human body temperature, underscoring its adaptation to a host-associated habitat. H. pylori is well-known for its colonization of the gastric epithelium in humans, where it can survive in the acidic environment of the stomach. The microaerophilic requirement indicates that this organism prefers low oxygen concentrations, which is typical of its ecological niche within the gastric mucus layer. This adaptation allows H. pylori to effectively evade the host's immune response and persist in the hostile gastric environment. The ability of H. pylori to maintain its structural integrity and metabolic functions under these conditions reflects its evolutionary specialization for survival in a unique ecological niche. This specialization may contribute to its role in various gastric conditions, although the specific pathogenic mechanisms and implications for human health associated with this strain are not detailed here. Understanding the physiological traits of H. pylori str. ATCC 43504 helps provide insights into its ecological dynamics and interactions within the human host.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainATCC 43504

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori str. ATCC 43504
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain ATCC 43504 chromosome, complete genome.

Gene Summary

Adenine Count

516487 bp

Thymine Count

511720 bp

Guanine Count

328791 bp

Cytosine Count

323831 bp

Genome Length

1680829 bp

Protein-coding Genes

1592 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaHPPMSS1_RS00005Not AvailablePositive1 - 137451825.4
type i restriction-modification system subunit mHPPMSS1_RS00010Not AvailablePositive1595 - 291048518.3
Trna-pheNot AvailableNot AvailablePositive2913 - 2988Not Available
exodeoxyribonuclease iiiHPPMSS1_RS00020Not AvailablePositive3090 - 384229267.9
outer membrane proteinHPPMSS1_RS00025Not AvailableNegative3839 - 447424749.9
hypothetical proteinHPPMSS1_RS00030Not AvailableNegative4478 - 482513261.2
atp-dependent dna helicase recgHPPMSS1_RS00035Not AvailablePositive4907 - 677871265.9
site-specific dna-methyltransferaseHPPMSS1_RS00040Not AvailablePositive6820 - 819052538.4
site-specific dna-methyltransferaseHPPMSS1_RS00045Not AvailablePositive8195 - 878222005.6
type iii restriction-modification system endonucleaseHPPMSS1_RS00050Not AvailablePositive8785 - 11700112048.0

Displaying genes 1 – 10 of 3179 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total