Olsenella umbonata lac31

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Coriobacteriia

Order

Coriobacteriales

Family

Atopobiaceae

Genus

Parafannyhessea

Description

Olsenella umbonata lac31 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. This strain's genetic information can be accessed through the accession number LT629759.1, providing a reference for further studies and comparisons with other microbial species. As a member of the genus Olsenella, this organism is expected to inhabit specific ecological niches within the microbiome, particularly in association with human health. While specific ecological roles of Olsenella umbonata lac31 are not detailed in the supplied evidence, members of the genus are often associated with the human oral cavity and gastrointestinal tract, where they may play a role in metabolic processes and microbial interactions. The presence of a single replicon suggests a streamlined genetic architecture, which can influence the organism's adaptability and response to environmental changes. This trait can be particularly relevant in understanding how Olsenella umbonata lac31 interacts with other microorganisms, as well as its potential contributions to the overall microbial community dynamics. In summary, Olsenella umbonata lac31, with its single replicon and identifiable genetic access point, represents a unique strain within the Olsenella genus. Its ecological role, while not explicitly defined, may contribute to the intricate balance of microbial communities in human-associated environments, warranting further investigation into its biological significance.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassCoriobacteriia
OrderCoriobacteriales
FamilyAtopobiaceae
GenusParafannyhessea
SpeciesParafannyhessea umbonata
Strainlac31

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Olsenella umbonata lac31, Chromosome

Gene Summary

Adenine Count

410966 bp

Thymine Count

413842 bp

Guanine Count

768382 bp

Cytosine Count

759903 bp

Genome Length

2353193 bp

Protein-coding Genes

2024 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abortive infection bacteriophage resistance proteinSAMN04489857_0476Not AvailableNegative524514 - 52547936782.6
superoxide reductaseSAMN04489857_0477Q30WF9Positive525670 - 52605014095.1
nad+ synthase (glutamine-hydrolysing)SAMN04489857_0478P74292Positive526152 - 52806568014.8
holliday junction endonuclease ruvcSAMN04489857_0479A4J535Positive528138 - 52879123297.8
holliday junction dna helicase subunit ruvaSAMN04489857_0480Q4K7D8Positive528788 - 52942022131.8
holliday junction dna helicase subunit ruvbSAMN04489857_0481A5D3G1Positive529475 - 53049737492.1
hypothetical proteinSAMN04489857_0482Not AvailablePositive530595 - 53098413610.1
cold-shock dna-binding protein familySAMN04489857_0483P0A356Positive531222 - 5314257535.72
succinyl-diaminopimelate desuccinylaseSAMN04489857_0484O34944Positive531571 - 53300151162.2
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or edSAMN04489857_0485Q94529Negative533018 - 53375526884.8

Displaying genes 461 – 470 of 2094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.